SOM cluster: 775

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 263
Promoter: 25%
CpG-Island: 13%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 1.3e-31
Factore-val(match)DB
SPI10.00000062898JASPAR
FEV0.0000062693JASPAR
SPIB0.000019107JASPAR
ELF50.00043608JASPAR
ELK40.00081798JASPAR
Sites: 23/100 | e-val: 0.16
Factore-val(match)DB
SPI10.000000010411JASPAR
FEV0.00000030401JASPAR
SPIB0.000002505JASPAR
ELF50.00002268JASPAR
ELK40.000025175JASPAR

BED file downloads

Download top of 263 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 146697100-146697250PDIA3P113.02
chr1: 146697100-146697250PRKAB213.02
chr4: 100733060-100733210DNAJB1447.8
chrX: 118149720-118149870KIAA121055.32
chrX: 118149720-118149870LONRF355.32
chr11: 60721340-60721490RNU6-933P56.55
chr2: 16831740-16831890FAM49A60.02
chr7: 33079325-33079475AC074338.563.03
chr7: 33079325-33079475RN7SL505P63.03
chr8: 38651520-38651670TACC163.29
View top connections.

Other

CodePlot