SOM cluster: 783

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 306
Promoter: 1%
CpG-Island: 0%
Conserved: 43%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 0.0013
Factore-val(match)DB
Lhx30.0000012511JASPAR
Foxd30.00025487JASPAR
HNF1A0.00054778JASPAR
Pax40.0052645JASPAR
HNF1B0.0098681JASPAR
Sites: 27/100 | e-val: 0.32
Factore-val(match)DB
Foxd30.00055838JASPAR
FOXA10.00080254JASPAR
Foxa20.0041826JASPAR
FOXF20.0044576JASPAR
FOXI10.0058014JASPAR
Sites: 12/100 | e-val: 1.6
Factore-val(match)DB
RELA0.00016313JASPAR
NF-kappaB0.00047664JASPAR
znf1430.0011262JASPAR
REL0.0047368JASPAR
Lhx30.0091724JASPAR

BED file downloads

Download top of 306 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 118744080-118744230EXT131.6
chr4: 86683460-86683610ARHGAP2457.13
chr3: 193698200-193698350DPPA2P360.16
chr5: 157254560-157254710THG1L61.06
chr8: 89190280-89190430MMP1661.81
chr1: 117466140-117466290PTGFRN63.95
chr5: 72936720-72936870ARHGEF2864.07
chr5: 58945000-58945150PDE4D65.63
chr17: 1026240-1026390ABR65.79
chr1: 101174140-101174290VCAM165.97
View top connections.

Other

CodePlot