SOM cluster: 818

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 74
Promoter: 20%
CpG-Island: 13%
Conserved: 37%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/74 | e-val: 5.6e-32
Factore-val(match)DB
SP10.000000005665JASPAR
PLAG10.00039961JASPAR
Pax40.0018804JASPAR
Tal1::Gata10.0039733JASPAR
SPI10.010841JASPAR
Sites: 44/74 | e-val: 0.0000000000021
Factore-val(match)DB
EWSR1-FLI10.00000017374JASPAR
SP10.00000064159JASPAR
Pax40.000036749JASPAR
PLAG10.00019402JASPAR
SPI10.001625JASPAR

BED file downloads

Download top of 74 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 47293400-47293550TNS343.21
chr9: 131008160-131008310DNM161.18
chr9: 131008160-131008310LCN261.18
chr11: 64638040-64638190CDC42BPG67.63
chr11: 64638040-64638190MIR194-267.63
chr11: 17373440-17373590ABCC871.38
chr11: 17373440-17373590NCR3LG171.38
chr6: 5085485-5085635RPP4073.22
chr6: 5085485-5085635RP11-530A18.173.22
chrX: 134124960-134125110MOSPD173.71
View top connections.

Other

CodePlot