SOM cluster: 821

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 287
Promoter: 11%
CpG-Island: 13%
Conserved: 44%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 82/100 | e-val: 0
Factore-val(match)DB
SP10.00000000097897JASPAR
Pax40.00020002JASPAR
Klf40.00020315JASPAR
TFAP2A0.0010128JASPAR
PLAG10.0021182JASPAR
Sites: 38/100 | e-val: 0.0013
Factore-val(match)DB
PLAG10.0000027623JASPAR
SP10.0007438JASPAR
INSM10.0021983JASPAR
Klf40.002863JASPAR
TFAP2A0.0033596JASPAR
Sites: 55/100 | e-val: 0.00000018
Factore-val(match)DB
SP10.000042169JASPAR
RXR::RAR_DR50.00015705JASPAR
PPARG::RXRA0.00022617JASPAR
SPIB0.00029903JASPAR
SPI10.0038752JASPAR

BED file downloads

Download top of 287 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 120663700-120663850RPLP044.67
chr1: 212856900-212857050BATF348.75
chr11: 1890105-1890255LSP151.55
chr17: 4835420-4835570GP1BA53.37
chr17: 4835420-4835570C17orf10753.37
chr1: 161275585-161275735C1orf19253.95
chr1: 161275585-161275735RP11-122G18.553.95
chr19: 50995560-50995710JOSD257.96
chr19: 50995560-50995710ASPDH57.96
chr19: 50995560-50995710FAM71E157.96
View top connections.

Other

CodePlot