SOM cluster: 824

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 264
Promoter: 29%
CpG-Island: 35%
Conserved: 40%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 95/100 | e-val: 3.5e-33
Factore-val(match)DB
SP10.00000000046141JASPAR
Klf40.000012111JASPAR
Egr10.0011639JASPAR
Pax40.0012721JASPAR
INSM10.0013829JASPAR
Sites: 43/100 | e-val: 0.0091
Factore-val(match)DB
SP10.0000000034511JASPAR
Pax40.0002571JASPAR
EWSR1-FLI10.00044585JASPAR
RXR::RAR_DR50.030136JASPAR
MZF1_1-40.032866JASPAR

BED file downloads

Download top of 264 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 67210345-67210495CABP448.05
chr19: 34856805-34856955GPI50.33
chr17: 76165700-76165850SYNGR251.01
chr17: 76165700-76165850AFMID51.01
chr19: 35740185-35740335LSR55.33
chr19: 35740185-35740335FAM187B55.33
chr19: 49621765-49621915SNRNP7056.8
chr19: 13876305-13876455CCDC13058.15
chr11: 67798640-67798790TCIRG160.88
chr11: 62312600-62312750MIR365462.47
View top connections.

Other

CodePlot