SOM cluster: 825

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 4090
Promoter: 28%
CpG-Island: 1%
Conserved: 36%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 57/100 | e-val: 0.0000000000018
Factore-val(match)DB
Foxd30.000047173JASPAR
Pax40.000075488JASPAR
Foxq10.0004111JASPAR
FOXI10.00060969JASPAR
SRY0.00076278JASPAR

BED file downloads

Download top of 4090 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145469905-145470055ANKRD34A12.92
chr1: 145469905-145470055HFE212.92
chr1: 150948505-150948655RP11-316M1.1213.02
chr1: 150948505-150948655ANXA913.02
chr1: 150948505-150948655CERS213.02
chr1: 150948505-150948655RP11-235D19.213.02
chr1: 150948505-150948655PRUNE13.02
chr1: 150601240-150601390ENSA15.6
chr1: 92350040-92350190TGFBR318.16
chr12: 132196405-132196555RP11-495K9.524.44
View top connections.

Other

CodePlot