SOM cluster: 833

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 2436
Promoter: 0%
CpG-Island: 0%
Conserved: 32%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 1.2e-30
Factore-val(match)DB
Foxd30.000059503JASPAR
Lhx30.0012563JASPAR
Foxq10.002794JASPAR
ARID3A0.012004JASPAR
NFATC20.021452JASPAR

BED file downloads

Download top of 2436 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 38617120-38617270TACC134.85
chr9: 116716105-116716255ZNF61837.03
chr1: 22223665-22223815HSPG239.89
chr9: 107591940-107592090NIPSNAP3B40.64
chr17: 68154840-68154990KCNJ241.65
chr8: 75178980-75179130RP1-16A9.147.59
chr3: 173462420-173462570NLGN151.33
chr1: 56614540-56614690RP4-710M16.153.47
chr11: 33747140-33747390CD5954.51
chr4: 146466240-146466390SMAD1-AS155.26
View top connections.

Other

CodePlot