SOM cluster: 843

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 354
Promoter: 1%
CpG-Island: 0%
Conserved: 35%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 32/100 | e-val: 0.00000006
Factore-val(match)DB
Foxd30.000017157JASPAR
FEV0.00021103JASPAR
EWSR1-FLI10.0013114JASPAR
NR1H2::RXRA0.0028811JASPAR
SRY0.0041552JASPAR
Sites: 45/100 | e-val: 0.00000018
Factore-val(match)DB
AP10.00000000050221JASPAR
NFE2L20.0000035803JASPAR
HNF1B0.00074046JASPAR
PPARG0.0015289JASPAR
PBX10.019304JASPAR

BED file downloads

Download top of 354 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr18: 12295500-12295650TUBB648.39
chr8: 103380460-103380610UBR549.62
chr13: 99431140-99431290DOCK951.43
chrX: 64898940-64899090MSN54.14
chr19: 33964825-33964975CEBPG54.75
chr6: 30715220-30715370IER355.93
chr3: 119488600-119488750MAATS157.02
chr15: 101723940-101724090VIMP57.36
chr1: 204167500-204167650RP11-74C13.358.47
chr11: 124587500-124587650MSANTD258.72
View top connections.

Other

CodePlot