SOM cluster: 867

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 2506
Promoter: 3%
CpG-Island: 0%
Conserved: 21%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 30/100 | e-val: 0.01
Factore-val(match)DB
Evi10.0000015214JASPAR
Tal1::Gata10.000005057JASPAR
Gata10.000011354JASPAR
GATA20.0092009JASPAR
NR3C10.013526JASPAR
Sites: 17/100 | e-val: 0.00045
Factore-val(match)DB
Pax40.0000022689JASPAR
EWSR1-FLI10.00012061JASPAR
SP10.00016517JASPAR
MZF1_5-130.00018345JASPAR
RREB10.00065307JASPAR

BED file downloads

Download top of 2506 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr15: 83309540-83309690RP11-752G15.340.75
chr9: 133951900-133952050RP11-544A12.440.98
chr9: 133951900-133952050RNU6-881P40.98
chr11: 12138080-12138230RP13-631K18.247.93
chrX: 65383900-65384050HEPH49.35
chr6: 26297420-26297570HIST1H4F49.74
chr6: 26297420-26297570RP1-34B20.449.74
chr4: 144825680-144825830GYPE52.13
chr4: 144825680-144825830RP11-673E1.352.13
chr4: 144825680-144825830GYPB52.13
View top connections.

Other

CodePlot