SOM cluster: 869

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 334
Promoter: 39%
CpG-Island: 79%
Conserved: 66%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
SP10.0000014172JASPAR
TFAP2A0.000081686JASPAR
Egr10.00067922JASPAR
PLAG10.0085361JASPAR
Klf40.035658JASPAR
Sites: 89/100 | e-val: 8.6e-39
Factore-val(match)DB
PLAG10.0000005156JASPAR
SP10.000029063JASPAR
Zfp4230.0017272JASPAR
RREB10.0029238JASPAR
Tal1::Gata10.011367JASPAR

BED file downloads

Download top of 334 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 144489885-144490035RNU6-220P41.98
chr8: 144489885-144490035MAFA41.98
chr22: 42322305-42322455CENPM46.95
chr19: 12267280-12267430ZNF84449.3
chr19: 12267280-12267430CTC-359D24.349.3
chr19: 12267280-12267430ZNF2049.3
chr19: 12267280-12267430ZNF62549.3
chr19: 12267280-12267430ZNF625-ZNF2049.3
chr1: 1027165-1027315AGRN51.64
chr12: 49483620-49483770RP11-386G11.357.62
View top connections.

Other

CodePlot