SOM cluster: 873

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 389
Promoter: 33%
CpG-Island: 16%
Conserved: 38%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 92/100 | e-val: 0
Factore-val(match)DB
SP10.00000057397JASPAR
Pax40.0000042994JASPAR
RREB10.000082072JASPAR
PLAG10.00087131JASPAR
EWSR1-FLI10.0017442JASPAR
Sites: 99/100 | e-val: 6.4e-27
Factore-val(match)DB
SP10.000028678JASPAR
PLAG10.000039069JASPAR
ESR10.0023904JASPAR
INSM10.0029008JASPAR
Zfx0.0034819JASPAR
Sites: 29/100 | e-val: 0.013
Factore-val(match)DB
HNF4A0.000000013774JASPAR
PPARG::RXRA0.000000037218JASPAR
NR1H2::RXRA0.0000082104JASPAR
NR2F10.000042362JASPAR
INSM10.00043209JASPAR

BED file downloads

Download top of 389 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 123326485-123326635DENR26.46
chr12: 123326485-123326635CCDC6226.46
chr19: 18722005-18722155CRTC135.31
chr16: 15083565-15083715PDXDC148.97
chr20: 61848225-61848375YTHDF151.87
chr19: 17354465-17354615USE152.97
chr19: 17354465-17354615NR2F652.97
chr16: 89761880-89762030CHMP1A53.03
chr16: 89761880-89762030SPATA2L53.03
chr16: 89761880-89762030FANCA53.03
View top connections.

Other

CodePlot