SOM cluster: 890

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1550
Promoter: 1%
CpG-Island: 0%
Conserved: 44%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 43/100 | e-val: 1.5e-21
Factore-val(match)DB
FEV0.0000022983JASPAR
Sox50.00021603JASPAR
ELF50.00049421JASPAR
SPI10.00097335JASPAR
SOX90.0035025JASPAR
Sites: 25/100 | e-val: 0.081
Factore-val(match)DB
SRY0.00000008486JASPAR
Foxq10.00000021583JASPAR
Sox50.00000097366JASPAR
Foxd30.0000090608JASPAR
SOX90.000021235JASPAR
Sites: 37/100 | e-val: 0.011
Factore-val(match)DB
HNF1B0.000081829JASPAR
FEV0.00022208JASPAR
Foxd30.00024559JASPAR
SPI10.0017474JASPAR
HNF1A0.0028033JASPAR

BED file downloads

Download top of 1550 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 12891320-12891470CAMK1D23.17
chr22: 37404540-37404690CSF2RB28.1
chr1: 70907180-70907330CTH31.79
chr1: 70907180-70907330HHLA331.79
chr4: 86728560-86728710ARHGAP2436.66
chr3: 159578640-159578790SCHIP136.79
chr15: 95844440-95844590CTD-2536I1.140.3
chr2: 97863120-97863270RN7SL313P43.14
chr8: 19314480-19314630SH2D4A44.93
chr8: 19314480-19314630CSGALNACT144.93
View top connections.

Other

CodePlot