SOM cluster: 919

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 118
Promoter: 6%
CpG-Island: 5%
Conserved: 45%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 68/100 | e-val: 0
Factore-val(match)DB
SPI10.0000000047698JASPAR
SPIB0.00000015151JASPAR
FEV0.0000041967JASPAR
ELK40.000012099JASPAR
ELF50.000023187JASPAR
Sites: 29/100 | e-val: 0.000051
Factore-val(match)DB
SPI10.0000000005102JASPAR
FEV0.000000012804JASPAR
ELF50.00000016672JASPAR
GABPA0.000001101JASPAR
ELK40.000070235JASPAR
Sites: 17/100 | e-val: 0.00005
Factore-val(match)DB
Myf0.00000032329JASPAR
SPI10.000015263JASPAR
FEV0.0019263JASPAR
Nr2e30.0024227JASPAR
NHLH10.0053886JASPAR

BED file downloads

Download top of 118 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 151589560-151589710RP11-454C18.244.06
chr5: 176889380-176889530PRR757.92
chr5: 176889380-176889530DOK357.92
chr4: 6940100-6940250KIAA023258.3
chr5: 100237720-100237870ST8SIA459.47
chr9: 130624560-130624710CDK964.02
chr9: 130624560-130624710PIP5KL164.02
chr20: 20715320-20715470RALGAPA266
chr10: 50391820-50391970VSTM466.35
chr10: 50391820-50391970C10orf12866.35
View top connections.

Other

CodePlot