SOM cluster: 938

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 372
Promoter: 3%
CpG-Island: 0%
Conserved: 52%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 7e-19
Factore-val(match)DB
Foxd30.00031171JASPAR
Foxq10.0019163JASPAR
SOX90.0032659JASPAR
SRY0.0044289JASPAR
Sox50.0096329JASPAR
Sites: 47/100 | e-val: 0.000000000000003
Factore-val(match)DB
FEV0.0000000085866JASPAR
ELF50.000005086JASPAR
SPI10.0000063476JASPAR
RELA0.00012561JASPAR
NFATC20.00041348JASPAR

BED file downloads

Download top of 372 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr6: 121864980-121865130RP11-129H15.131.68
chr6: 121864980-121865130GJA131.68
chr6: 121864980-121865130RNU4-35P31.68
chr22: 39827820-39827970MIEF135.56
chr22: 39827820-39827970MGAT335.56
chr22: 39827820-39827970RPS19BP135.56
chr6: 8000745-8000895TXNDC539.48
chr6: 8000745-8000895BLOC1S5-TXNDC539.48
chr8: 90742160-90742310RIPK246.72
chr4: 38052780-38052930MRPS33P246.99
View top connections.

Other

CodePlot