SOM cluster: 941

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 136
Promoter: 5%
CpG-Island: 0%
Conserved: 60%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 58/100 | e-val: 2e-30
Factore-val(match)DB
NFE2L20.000000000056009JASPAR
AP10.000000002581JASPAR
NFE2L1::MafG0.001007JASPAR
Pax20.0036496JASPAR
PPARG0.0063706JASPAR
Sites: 28/100 | e-val: 0.12
Factore-val(match)DB
Foxd30.000030053JASPAR
HNF1B0.000054355JASPAR
SPIB0.000070644JASPAR
MEF2A0.00010102JASPAR
FOXI10.00022275JASPAR
Sites: 20/100 | e-val: 0.13
Factore-val(match)DB
Foxd30.0000000003029JASPAR
Foxq10.0000000032843JASPAR
FOXF20.00000031847JASPAR
FOXA10.0000058007JASPAR
FOXI10.0000065947JASPAR

BED file downloads

Download top of 136 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr2: 159395800-159395950PKP455.89
chr17: 64563940-64564090PRKCA57.75
chr18: 7922400-7922550PTPRM59.13
chr1: 8772340-8772490RERE59.14
chr9: 117566960-117567110TNFSF860.24
chr9: 117566960-117567110TNFSF1560.24
chr11: 36031180-36031330LDLRAD361.18
chr2: 11816260-11816410AC106875.162.94
chr5: 159890860-159891010MIR146A63.6
chr11: 110019620-110019770RDX64.03
View top connections.

Other

CodePlot