SOM cluster: 943

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 123
Promoter: 5%
CpG-Island: 0%
Conserved: 65%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 44/100 | e-val: 1.4e-26
Factore-val(match)DB
TLX1::NFIC0.0000000052047JASPAR
NFATC20.00000069697JASPAR
Spz10.00025599JASPAR
NFIC0.0011451JASPAR
Sox20.0061604JASPAR
Sites: 25/100 | e-val: 0.39
Factore-val(match)DB
AP10.0000000046856JASPAR
NFE2L20.0000000074968JASPAR
NFE2L1::MafG0.00010155JASPAR
RXRA::VDR0.0068047JASPAR
PPARG0.0095986JASPAR

BED file downloads

Download top of 123 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 12204520-12204670MICAL243.96
chr3: 35974560-35974710AC104308.245.24
chr9: 120466340-120466490RP11-281A20.249.75
chr9: 120466340-120466490TLR449.75
chr8: 80816120-80816270TPD5252.7
chr8: 80816120-80816270MRPS2852.7
chr8: 126478800-126478950RP11-136O12.257.38
chr10: 93884400-93884550BTAF161.85
chr1: 99368960-99369110LPPR567.91
chr4: 95333900-95334050PDLIM569.39
View top connections.

Other

CodePlot