SOM cluster: 957

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 417
Promoter: 8%
CpG-Island: 4%
Conserved: 38%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 29/100 | e-val: 0.0000000021
Factore-val(match)DB
SP10.00000057283JASPAR
Pax40.000002904JASPAR
EWSR1-FLI10.00003886JASPAR
RXR::RAR_DR50.0020886JASPAR
RREB10.0029792JASPAR
Sites: 25/100 | e-val: 0.19
Factore-val(match)DB
Foxd30.002724JASPAR
EWSR1-FLI10.0084744JASPAR
NFATC20.012165JASPAR
SPIB0.021089JASPAR
FEV0.028843JASPAR

BED file downloads

Download top of 417 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr21: 47414420-47414570COL6A142.29
chr3: 16440945-16441095RFTN144.86
chr1: 21668940-21669090ECE146.98
chr11: 10659960-10660110MRVI1-AS147.08
chr11: 10659960-10660110MRVI147.08
chr5: 72715565-72715715FOXD149.26
chr19: 48223065-48223215TPRX151.21
chr2: 127933100-127933250ERCC352.68
chr4: 148402080-148402230EDNRA53.18
chr16: 86532685-86532835FOXF155.11
View top connections.

Other

CodePlot