SOM cluster: 96

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 425
Promoter: 90%
CpG-Island: 97%
Conserved: 93%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
SP10.000000018948JASPAR
Klf40.00021843JASPAR
Egr10.013259JASPAR
PLAG10.016981JASPAR
NHLH10.020945JASPAR
Sites: 87/100 | e-val: 0
Factore-val(match)DB
SP10.00002963JASPAR
PLAG10.0015446JASPAR
TFAP2A0.002084JASPAR
Klf40.025716JASPAR
Egr10.054819JASPAR
Sites: 45/100 | e-val: 0.00000082
Factore-val(match)DB
Klf40.0000000021009JASPAR
SP10.00000032376JASPAR
Egr10.00033822JASPAR
Zfx0.0025501JASPAR
TFAP2A0.011305JASPAR

BED file downloads

Download top of 425 regions.

Top 10 Example Regions

LocationGene LinkDist.
chrX: 47420820-47420970CXorf2445.22
chr11: 88070860-88071010CTSC47.51
chr1: 151043600-151043750BNIPL50.22
chr8: 124253560-124253710TBC1D3152.13
chr8: 124253560-124253710FAM83A-AS152.13
chr2: 215674385-215674535BARD154.89
chr5: 109024980-109025130KRT18P4255.85
chr4: 39367960-39368110LIAS56.34
chr4: 39367960-39368110KLB56.34
chr17: 6554840-6554990SLC13A556.78
View top connections.

Other

CodePlot