SOM cluster: 964

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 374
Promoter: 11%
CpG-Island: 4%
Conserved: 25%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 38/100 | e-val: 0.0000000000015
Factore-val(match)DB
PPARG::RXRA0.0000000042134JASPAR
HNF4A0.0000015851JASPAR
SP10.0000034236JASPAR
NR2F10.000050654JASPAR
Pax40.0010243JASPAR
Sites: 19/100 | e-val: 0.023
Factore-val(match)DB
TFAP2A0.0033639JASPAR
REST0.0040965JASPAR
TEAD10.0090049JASPAR
TLX1::NFIC0.011634JASPAR
PLAG10.012539JASPAR
Sites: 28/100 | e-val: 0.00076
Factore-val(match)DB
SP10.00000000000035083JASPAR
INSM10.00001614JASPAR
Pax40.00081798JASPAR
Klf40.0041915JASPAR
MZF1_1-40.012826JASPAR

BED file downloads

Download top of 374 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 1060065-1060215TNFRSF1843.29
chr1: 1060065-1060215TTLL10-AS143.29
chr11: 70863665-70863815SHANK262.16
chr12: 54381385-54381535HOXC663.46
chr12: 54381385-54381535HOXC1263.46
chr12: 54381385-54381535HOXC13-AS63.46
chr12: 54381385-54381535HOXC963.46
chr12: 54381385-54381535HOXC-AS163.46
chr12: 54381385-54381535HOXC1063.46
chr12: 54381385-54381535HOXC-AS363.46
View top connections.

Other

CodePlot