SOM cluster: 975

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 238
Promoter: 30%
CpG-Island: 16%
Conserved: 67%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 44/100 | e-val: 0.00000000059
Factore-val(match)DB
ARID3A0.000057725JASPAR
Pax40.00057659JASPAR
Foxq10.0027549JASPAR
HNF1B0.0048998JASPAR
Foxd30.0064527JASPAR

BED file downloads

Download top of 238 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr4: 125631560-125631850ANKRD5027.52
chr4: 74904880-74905030CXCL239.85
chr8: 32404645-32404795NRG153.17
chr5: 124081660-124081810ZNF60854.66
chr11: 59323520-59323670PATL159.77
chr10: 21807140-21807290SKIDA161.19
chr10: 21807140-21807290MLLT1061.19
chr6: 13924365-13924515RNF18261.91
chr21: 46852825-46852975COL18A162.1
chr11: 110167800-110167950RDX63.02
View top connections.

Other

CodePlot