SOM cluster: 976

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 400
Promoter: 26%
CpG-Island: 16%
Conserved: 38%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 30/100 | e-val: 0.014
Factore-val(match)DB
SP10.00000029175JASPAR
Klf40.0042933JASPAR
Pax40.0072233JASPAR
MZF1_5-130.019173JASPAR
Egr10.020461JASPAR

BED file downloads

Download top of 400 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 110227745-110227895KLF445.63
chr3: 50651740-50651890MAPKAPK348.39
chr3: 50651740-50651890C3orf1848.39
chr19: 12905160-12905310DNASE250.84
chr19: 12905160-12905310JUNB50.84
chr19: 12905160-12905310RNASEH2A50.84
chr18: 21243085-21243235Y_RNA50.84
chr3: 133266765-133266915TOPBP152.55
chr1: 26148265-26148415SEPN152.94
chr1: 26148265-26148415RP1-317E23.652.94
View top connections.

Other

CodePlot