SOM cluster: 977

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 2457
Promoter: 0%
CpG-Island: 0%
Conserved: 35%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 70/100 | e-val: 1.6e-34
Factore-val(match)DB
ARID3A0.0055436JASPAR
Prrx20.0086077JASPAR
NFATC20.011141JASPAR
MEF2A0.013361JASPAR
Nkx2-50.018861JASPAR
Sites: 44/100 | e-val: 0.0000033
Factore-val(match)DB
IRF10.00026221JASPAR
Foxd30.00042033JASPAR
MEF2A0.0024472JASPAR
SPIB0.0069558JASPAR
FOXA10.0069956JASPAR
Sites: 25/100 | e-val: 0.58
Factore-val(match)DB
znf1430.0033837JASPAR
Lhx30.0054951JASPAR
HNF1B0.022155JASPAR
Foxd30.02778JASPAR
HOXA50.031287JASPAR

BED file downloads

Download top of 2457 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150228600-150228750C1orf5421.77
chr1: 150228600-150228750MRPS2121.77
chr1: 150228600-150228750PRPF321.77
chr7: 106413440-106413590RP5-884M6.135.24
chr8: 42358540-42358690SLC20A238.93
chr8: 54436780-54436930RP11-400K9.440.79
chr10: 90734560-90734710STAMBPL141.67
chr8: 19980100-19980250SLC18A141.94
chr8: 94850365-94850515PDP142.2
chr10: 16874460-16874610RSU142.36
View top connections.

Other

CodePlot