SOM cluster: 985

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 558
Promoter: 3%
CpG-Island: 0%
Conserved: 61%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 40/100 | e-val: 0.00000000012
Factore-val(match)DB
FOXI10.0026551JASPAR
Foxd30.0037995JASPAR
Evi10.0055312JASPAR
IRF10.0066319JASPAR
Lhx30.0079212JASPAR
Sites: 20/100 | e-val: 0.0014
Factore-val(match)DB
SOX90.00015991JASPAR
NFATC20.0010473JASPAR
MEF2A0.0019471JASPAR
Sox20.0041627JASPAR
NR3C10.0041666JASPAR

BED file downloads

Download top of 558 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145478080-145478230TXNIP13.56
chr1: 145478080-145478230RBM8A13.56
chr1: 145478080-145478230GNRHR213.56
chr10: 17252440-17252590RP11-124N14.333.85
chr10: 17252440-17252590VIM33.85
chr10: 17252440-17252590CUBN33.85
chr10: 17252440-17252590VIM-AS133.85
chr4: 90418200-90418350RP11-115D19.142.74
chr17: 15372825-15372975TVP23C45.46
chr17: 15372825-15372975RN7SL792P45.46
View top connections.

Other

CodePlot