Gene: PRKCD
chr3: 53190024-53213710Expression Profile
(log scale)
Graphical Connections
Distribution of linked clusters:
You may find it interesting if many of the connected DHS sites belong to the same cluster.| Cluster Profile | Cluster ID | Number of DHS sites in this cluster |
|---|---|---|
 | 579 | 6 |
 | 570 | 6 |
 | 521 | 5 |
 | 217 | 3 |
 | 326 | 3 |
 | 331 | 2 |
 | 330 | 2 |
 | 1505 | 2 |
 | 120 | 2 |
 | 393 | 1 |
 | 472 | 1 |
 | 1911 | 1 |
 | 373 | 1 |
 | 1763 | 1 |
 | 418 | 1 |
 | 623 | 1 |
 | 15 | 1 |
 | 2062 | 1 |
 | 528 | 1 |
 | 1307 | 1 |
 | 20 | 1 |
 | 219 | 1 |
 | 226 | 1 |
 | 2168 | 1 |
 | 582 | 1 |
 | 624 | 1 |
 | 475 | 1 |
 | 674 | 1 |
 | 430 | 1 |
 | 31 | 1 |
 | 125 | 1 |
 | 821 | 1 |
 | 2218 | 1 |
 | 1159 | 1 |
 | 1812 | 1 |
 | 370 | 1 |
 | 379 | 1 |
 | 1323 | 1 |
 | 569 | 1 |
 | 400 | 1 |
 | 2066 | 1 |
 | 419 | 1 |
 | 870 | 1 |
 | 500 | 1 |
 | 806 | 1 |
 | 477 | 1 |
 | 2063 | 1 |
 | 523 | 1 |
 | 511 | 1 |
 | 979 | 1 |
 | 824 | 1 |
 | 1653 | 1 |
 | 469 | 1 |
 | 22 | 1 |
 | 275 | 1 |
 | 1258 | 1 |
 | 615 | 1 |
 | 2203 | 1 |
 | 466 | 1 |
 | 334 | 1 |
Resources
BED file downloads
Connects to 82 DHS sitesTop 10 Correlated DHS Sites
p-values indiciate significant higher or lower correlation| Location | Cluster | P-value |
|---|---|---|
| chr3:53204460-53204610 | 331 | 0 |
| chr3:53204300-53204450 | 125 | 0 |
| chr3:53196400-53196550 | 330 | 0 |
| chr3:53214840-53214990 | 275 | 0.001 |
| chr3:53204645-53204795 | 579 | 0.004 |
| chr3:53204840-53204990 | 579 | 0.004 |
| chr3:53214440-53214590 | 579 | 0.004 |
| chr3:53215160-53215310 | 217 | 0.004 |
| chr3:53197265-53197415 | 22 | 0.004 |
| chr3:53286240-53286390 | 579 | 0.004 |
| chr3:53107300-53107450 | 219 | 0.004 |
External Databases
UCSCEnsembl (ENSG00000163932)