Gene: AGRN
chr1: 955502-991496Expression Profile
(log scale)Graphical Connections
Distribution of linked clusters:
You may find it interesting if many of the connected DHS sites belong to the same cluster.Cluster Profile | Cluster ID | Number of DHS sites in this cluster |
---|---|---|
1078 | 22 | |
2279 | 11 | |
2122 | 6 | |
1008 | 5 | |
1159 | 4 | |
1704 | 4 | |
1259 | 3 | |
570 | 3 | |
1604 | 3 | |
1323 | 2 | |
193 | 2 | |
1025 | 2 | |
91 | 2 | |
1372 | 2 | |
84 | 2 | |
1258 | 2 | |
1125 | 2 | |
1107 | 2 | |
1525 | 2 | |
2072 | 2 | |
772 | 1 | |
481 | 1 | |
469 | 1 | |
872 | 1 | |
1356 | 1 | |
32 | 1 | |
1205 | 1 | |
1681 | 1 | |
914 | 1 | |
770 | 1 | |
1257 | 1 | |
2450 | 1 | |
668 | 1 | |
1225 | 1 | |
1058 | 1 | |
1652 | 1 | |
1273 | 1 | |
1156 | 1 | |
1424 | 1 | |
2319 | 1 | |
143 | 1 | |
348 | 1 | |
721 | 1 | |
1357 | 1 | |
1155 | 1 | |
511 | 1 | |
2052 | 1 | |
765 | 1 | |
1057 | 1 | |
869 | 1 | |
2327 | 1 | |
2020 | 1 | |
1120 | 1 | |
217 | 1 | |
2216 | 1 | |
251 | 1 | |
125 | 1 | |
2171 | 1 | |
2218 | 1 | |
2068 | 1 |
Resources
BED file downloads
Connects to 123 DHS sitesTop 10 Correlated DHS Sites
p-values indiciate significant higher or lower correlationLocation | Cluster | P-value |
---|---|---|
chr1:960140-960290 | 2450 | 0.002 |
chr1:1014920-1015070 | 348 | 0.002 |
chr1:957325-957475 | 1681 | 0.002 |
chr1:1058640-1058790 | 1273 | 0.024 |
chr1:998205-998355 | 2279 | 0.023 |
chr1:913925-914075 | 1078 | 0.023 |
chr1:1077465-1077615 | 2327 | 0.023 |
chr1:1024005-1024155 | 1078 | 0.023 |
chr1:899165-899315 | 1078 | 0.023 |
chr1:896645-896795 | 1357 | 0.023 |
chr1:955605-955755 | 1159 | 0.022 |
External Databases
UCSCEnsembl (ENSG00000188157)