SOM cluster: 100

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 953
Promoter: 86%
CpG-Island: 98%
Conserved: 93%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 100/100 | e-val: 2.7e-30
Factore-val(match)DB
SP10.0000000076473JASPAR
Klf40.000035303JASPAR
TFAP2A0.0043984JASPAR
Egr10.016818JASPAR
PLAG10.028715JASPAR
Sites: 23/100 | e-val: 0.0058
Factore-val(match)DB
Egr10.00075722JASPAR
NHLH10.0012798JASPAR
Pax60.01649JASPAR
CEBPA0.02777JASPAR
TP530.06069JASPAR

BED file downloads

Download top of 953 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150849180-150849330CERS223.74
chr1: 150849180-150849330CYCSP5123.74
chr1: 151138420-151138570MLLT1139.77
chr11: 62341265-62341415MTA240.43
chr7: 108166560-108166710DNAJB946.81
chr1: 150602120-150602270GOLPH3L48.59
chr1: 150602120-150602270RP11-54A4.248.59
chr2: 135676160-135676310ACMSD52.88
chr15: 90931180-90931330AC091167.354.35
chr1: 33938120-33938270ZSCAN2056.99
View top connections.

Other

CodePlot