SOM cluster: 1000

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 126
Promoter: 6%
CpG-Island: 4%
Conserved: 56%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 58/100 | e-val: 6.8e-36
Factore-val(match)DB
NFE2L20.00000000053665JASPAR
AP10.000000057317JASPAR
NFE2L1::MafG0.020687JASPAR
Pax20.022466JASPAR
Foxa20.034804JASPAR
Sites: 35/100 | e-val: 1
Factore-val(match)DB
SP10.0000059087JASPAR
EWSR1-FLI10.0000096415JASPAR
SPIB0.000039734JASPAR
TEAD10.0001949JASPAR
MZF1_1-40.00061848JASPAR
Sites: 21/100 | e-val: 1.3
Factore-val(match)DB
SP10.000055537JASPAR
Tcfcp2l10.004433JASPAR
TFAP2A0.020846JASPAR
ZEB10.02885JASPAR
Pax40.030961JASPAR

BED file downloads

Download top of 126 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 65487300-65487450snoU1352.68
chr17: 65487300-65487450RN7SL756P52.68
chr11: 130348220-130348370ADAMTS1557.27
chr11: 130348220-130348370RP11-121M22.157.27
chr17: 74705300-74705450SRSF260.25
chr17: 74705300-74705450MXRA760.25
chr3: 124531700-124531850ITGB565.43
chr3: 124531700-124531850KALRN65.43
chr3: 124531700-124531850ENO1P365.43
chr3: 124531700-124531850ITGB5-AS165.43
View top connections.

Other

CodePlot