SOM cluster: 1001

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 188
Promoter: 37%
CpG-Island: 78%
Conserved: 79%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 100/100 | e-val: 0
Factore-val(match)DB
SP10.00002448JASPAR
PLAG10.0019671JASPAR
Egr10.0026717JASPAR
TFAP2A0.013998JASPAR
Klf40.037743JASPAR
Sites: 89/100 | e-val: 2.8e-37
Factore-val(match)DB
SP10.00000096246JASPAR
Pax50.00002683JASPAR
PLAG10.000077676JASPAR
TFAP2A0.000091189JASPAR
EWSR1-FLI10.0074327JASPAR

BED file downloads

Download top of 188 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 180881505-180881655RP11-46A10.446.38
chr4: 187645780-187645930FAT150.07
chr3: 157260945-157261095C3orf5551.76
chr3: 157260945-157261095PTX351.76
chrX: 73640600-73640750PRKRIRP155.81
chrX: 73640600-73640750SLC16A255.81
chr7: 43152985-43153135HECW1-IT158.53
chr7: 43152985-43153135HECW158.53
chr7: 45960785-45960935IGFBP358.79
chr7: 45960785-45960935FTLP1558.79
View top connections.

Other

CodePlot