SOM cluster: 1015

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 162
Promoter: 10%
CpG-Island: 5%
Conserved: 38%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 23/100 | e-val: 0.0000000007
Factore-val(match)DB
HNF4A0.0000000000035666JASPAR
NR2F10.000000000064099JASPAR
NR1H2::RXRA0.00000065985JASPAR
PPARG::RXRA0.000019139JASPAR
NFIC0.0015613JASPAR

BED file downloads

Download top of 162 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 75473300-75473450ALDH1A141.93
chr9: 75473300-75473450RP11-151D14.141.93
chrX: 2845740-2845890GYG251.78
chrX: 2845740-2845890ARSE51.78
chr7: 47620060-47620210TNS354.67
chr7: 47620060-47620210AC095067.154.67
chr9: 78988160-78988310PCSK560.21
chr16: 75340320-75340470BCAR161.05
chr16: 75340320-75340470CTRB261.05
chr20: 49016740-49016890RP11-290F20.162.36
View top connections.

Other

CodePlot