SOM cluster: 1016

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 135
Promoter: 11%
CpG-Island: 4%
Conserved: 53%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 37/100 | e-val: 0.00000000000023
Factore-val(match)DB
HNF1A1.1102e-16JASPAR
HNF1B0.00000000000018774JASPAR
Lhx30.00016711JASPAR
ARID3A0.0011011JASPAR
NR1H2::RXRA0.001903JASPAR
Sites: 23/100 | e-val: 0.06
Factore-val(match)DB
Foxa20.0000000000015172JASPAR
FOXA10.000000000048198JASPAR
FOXO30.00000077958JASPAR
FOXD10.0000010331JASPAR
FOXF20.000025644JASPAR

BED file downloads

Download top of 135 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 33624800-33624950NRP153.16
chr11: 27417180-27417330LGR453.69
chr11: 27076740-27076890BBOX161.35
chr1: 8087480-8087630ERRFI172.69
chr19: 39617340-39617490FBXO2773.66
chr19: 39617340-39617490PAK473.66
chr9: 119329340-119329490RP11-67K19.374.31
chr6: 80314480-80314630LCA575.28
chr22: 29314200-29314350ZNRF376.12
chr7: 111851500-111851650RN7SKP18776.67
View top connections.

Other

CodePlot