SOM cluster: 1024

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 217
Promoter: 28%
CpG-Island: 11%
Conserved: 48%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 22/100 | e-val: 0.000029
Factore-val(match)DB
EWSR1-FLI10.00011996JASPAR
NFATC20.00034226JASPAR
IRF20.0013889JASPAR
FEV0.0019217JASPAR
IRF10.003541JASPAR

BED file downloads

Download top of 217 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 93772600-93772750MRPL4228.93
chr3: 48128725-48128875CDC25A34.11
chr3: 48128725-48128875NDUFB1P134.11
chr3: 48128725-48128875MAP434.11
chr2: 29337900-29338050CLIP441.73
chr17: 18088840-18088990LLGL145.99
chr17: 18088840-18088990TOP3A45.99
chr6: 119671760-119671910MAN1A148.22
chr11: 18406145-18406295LDHA49.38
chr17: 73865640-73865790TRIM4749.91
View top connections.

Other

CodePlot