SOM cluster: 1050

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 189
Promoter: 2%
CpG-Island: 1%
Conserved: 58%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 43/100 | e-val: 4.9e-16
Factore-val(match)DB
RUNX10.000000031835JASPAR
RREB10.000041208JASPAR
ZNF354C0.00085089JASPAR
Tcfcp2l10.0015637JASPAR
IRF20.0044235JASPAR
Sites: 29/100 | e-val: 0.00094
Factore-val(match)DB
Tal1::Gata10.0024091JASPAR
Myf0.0025683JASPAR
ZNF354C0.0044614JASPAR
SP10.0083487JASPAR
NFATC20.010986JASPAR
Sites: 27/100 | e-val: 0.0023
Factore-val(match)DB
AP10.00000000011296JASPAR
NFE2L20.0000000090165JASPAR
PPARG0.0035063JASPAR
NFE2L1::MafG0.0045934JASPAR
PBX10.0072312JASPAR

BED file downloads

Download top of 189 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 149184100-149184250RP11-278L15.329.1
chr3: 149184100-149184250WWTR129.1
chr3: 149184100-149184250RP11-278L15.229.1
chr3: 149184100-149184250TM4SF429.1
chr3: 149184100-149184250TM4SF129.1
chr2: 109743020-109743170SH3RF343.82
chr17: 59385920-59386070TBX245.79
chr17: 17839200-17839350AC087163.350.8
chr17: 17839200-17839350ATPAF250.8
chr17: 17839200-17839350TOM1L250.8
View top connections.

Other

CodePlot