SOM cluster: 1059

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 182
Promoter: 6%
CpG-Island: 0%
Conserved: 41%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 19/100 | e-val: 0.79
Factore-val(match)DB
NR2F10JASPAR
HNF4A0.000000000005135JASPAR
NR1H2::RXRA0.000000035705JASPAR
PPARG::RXRA0.00000012088JASPAR
NR4A20.0000051094JASPAR

BED file downloads

Download top of 182 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 139438485-139438635NOTCH140.98
chr12: 120988020-120988170DYNLL153.46
chr12: 120988020-120988170RPL29P2453.46
chr5: 175868140-175868290KIAA119159.61
chr5: 175868140-175868290SIMC159.61
chr4: 152126300-152126450SH3D1959.95
chr17: 188820-188970RPH3AL65.77
chr17: 188820-188970C17orf9765.77
chr1: 214217980-214218130PROX168.35
chr1: 214217980-214218130PROX1-AS168.35
View top connections.

Other

CodePlot