SOM cluster: 1064

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 145
Promoter: 15%
CpG-Island: 1%
Conserved: 51%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 0
Factore-val(match)DB
HNF1A0JASPAR
HNF1B0.0000000000000027756JASPAR
Lhx30.000093076JASPAR
ARID3A0.0013126JASPAR
Prrx20.0013319JASPAR
Sites: 24/100 | e-val: 0.006
Factore-val(match)DB
Myf0.00040374JASPAR
Pax50.00061675JASPAR
INSM10.001659JASPAR
Stat30.0030038JASPAR
Pax60.0067258JASPAR

BED file downloads

Download top of 145 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 139414585-139414735SEC16A50.87
chr11: 118900160-118900310RP11-110I1.663.01
chr11: 118900160-118900310HYOU163.01
chr11: 118900160-118900310DPAGT163.01
chr11: 118900160-118900310UPK263.01
chr11: 118900160-118900310TRAPPC463.01
chr11: 118900160-118900310SLC37A463.01
chr2: 8820660-8820810ID265.77
chr2: 8820660-8820810AC011747.465.77
chr1: 17906880-17907030ARHGEF10L68.39
View top connections.

Other

CodePlot