SOM cluster: 1072

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 287
Promoter: 31%
CpG-Island: 44%
Conserved: 38%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 89/100 | e-val: 1.2e-32
Factore-val(match)DB
SP10.000000020236JASPAR
Pax40.00039037JASPAR
EWSR1-FLI10.0045485JASPAR
PLAG10.019972JASPAR
RREB10.028023JASPAR
Sites: 21/100 | e-val: 0.66
Factore-val(match)DB
RREB10.00022691JASPAR
EWSR1-FLI10.00054833JASPAR
znf1430.0013436JASPAR
SP10.0048702JASPAR
TFAP2A0.008049JASPAR

BED file downloads

Download top of 287 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr16: 122185-122335HBZ39.13
chr16: 122185-122335HBZP139.13
chr12: 6936925-6937075SPSB246.22
chr12: 6936925-6937075GPR16246.22
chr12: 6936925-6937075LAG346.22
chr12: 6936925-6937075PTMS46.22
chr12: 6936925-6937075MLF246.22
chr12: 6936925-6937075RPL13P546.22
chr12: 6936925-6937075USP546.22
chr12: 6936925-6937075RN7SL380P46.22
View top connections.

Other

CodePlot