SOM cluster: 1078

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 13903
Promoter: 6%
CpG-Island: 24%
Conserved: 51%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 99/100 | e-val: 0
Factore-val(match)DB
SP10.000013863JASPAR
EWSR1-FLI10.00028086JASPAR
PLAG10.001309JASPAR
Pax40.0026453JASPAR
RXR::RAR_DR50.0042615JASPAR
Sites: 88/100 | e-val: 3.3e-25
Factore-val(match)DB
NHLH10.0058246JASPAR
CTCF0.0069796JASPAR
PLAG10.012374JASPAR
Zfp4230.01593JASPAR
znf1430.021079JASPAR
Sites: 44/100 | e-val: 0.00000022
Factore-val(match)DB
TFAP2A0.0000025561JASPAR
PLAG10.000014882JASPAR
SP10.000048897JASPAR
Pax40.014397JASPAR
INSM10.022927JASPAR
Sites: 44/100 | e-val: 0.00047
Factore-val(match)DB
Myf0.0048885JASPAR
Zfx0.006783JASPAR
SPI10.027539JASPAR
MIZF0.042261JASPAR
NHLH10.044847JASPAR

BED file downloads

Download top of 13903 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 145473500-145473650RBM8A13
chr1: 149673685-149673835RP11-196G18.320.32
chr1: 149673685-149673835RP11-196G18.2120.32
chr1: 149673685-149673835HIST2H2BF20.32
chr5: 3595120-3595270IRX127.31
chr5: 3595120-3595270CTD-2012M11.327.31
chr6: 39196485-39196635KCNK532.12
chr9: 139505645-139505795EGFL732.78
chr12: 6933345-6933495RN7SL380P33.63
chr12: 6933345-6933495ENO233.63
View top connections.

Other

CodePlot