SOM cluster: 1082

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 356
Promoter: 6%
CpG-Island: 1%
Conserved: 36%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 14/100 | e-val: 0.011
Factore-val(match)DB
Pax40.001165JASPAR
NFATC20.0015016JASPAR
HNF1B0.0022519JASPAR
NR2F10.0024366JASPAR
Foxd30.011414JASPAR

BED file downloads

Download top of 356 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 65215765-65215915ERBB2IP45.59
chr11: 65216760-65216910NEAT148.16
chr2: 228582985-228583135AC064853.350.52
chr2: 228582985-228583135SLC19A350.52
chr3: 133266325-133266475TOPBP150.6
chr3: 133266325-133266475BFSP250.6
chr9: 133670445-133670595ABL151.47
chr2: 152194440-152194590TNFAIP651.83
chr2: 152194440-152194590RN7SL124P51.83
chr1: 145093560-145093710SEC22B53.41
View top connections.

Other

CodePlot