SOM cluster: 110

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 2519
Promoter: 4%
CpG-Island: 42%
Conserved: 40%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 81/100 | e-val: 6.3e-27
Factore-val(match)DB
SP10.0000000090733JASPAR
Klf40.00048464JASPAR
Pax40.00067791JASPAR
INSM10.00091073JASPAR
TFAP2A0.0022869JASPAR
Sites: 47/100 | e-val: 0.00000066
Factore-val(match)DB
CTCF0.000000011244JASPAR
PLAG10.0038224JASPAR
INSM10.0040553JASPAR
TFAP2A0.019984JASPAR
Zfp4230.021258JASPAR

BED file downloads

Download top of 2519 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 151105905-151106055GABPB213.02
chr17: 38502585-38502735RARA23.47
chr17: 38502585-38502735WIPF223.47
chr1: 149719385-149719535RP11-196G18.327.09
chr10: 17269160-17269310TRDMT132.98
chr1: 145533505-145533655ANKRD34A39.45
chr1: 145533505-145533655POLR3GL39.45
chr1: 145533505-145533655LIX1L39.45
chr1: 151458265-151458415CGN41.85
chr4: 189702900-189703050RP11-756P10.544.67
View top connections.

Other

CodePlot