SOM cluster: 1100

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 147
Promoter: 1%
CpG-Island: 0%
Conserved: 43%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 0.0000000000000025
Factore-val(match)DB
AP10.000000018456JASPAR
NFE2L20.000000024806JASPAR
NFE2L1::MafG0.0042933JASPAR
Pax20.037899JASPAR
GATA20.067526JASPAR
Sites: 35/100 | e-val: 0.0000009
Factore-val(match)DB
CEBPA0.0000000036057JASPAR
HLF0.00003731JASPAR
Pou5f10.00044825JASPAR
Sox20.00072302JASPAR
Ddit3::Cebpa0.0011168JASPAR

BED file downloads

Download top of 147 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr12: 102319260-102319410RP11-512N21.147.04
chr12: 102319260-102319410RP11-554E23.347.04
chr12: 102319260-102319410DRAM147.04
chr13: 52778200-52778350RP11-248G5.851.4
chr13: 52778200-52778350MRPS31P551.4
chrX: 73671100-73671250RPS7P1454.22
chrX: 73671100-73671250SLC16A254.22
chr2: 28671200-28671350FOSL256.79
chr8: 67042140-67042290DNAJC5B57.69
chr8: 67042140-67042290CRH57.69
View top connections.

Other

CodePlot