SOM cluster: 111

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 16567
Promoter: 2%
CpG-Island: 37%
Conserved: 38%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
TFAP2A0.000256JASPAR
SP10.00042673JASPAR
PLAG10.01417JASPAR
Klf40.018111JASPAR
Egr10.028388JASPAR
Sites: 89/100 | e-val: 7.4e-29
Factore-val(match)DB
SP10.000000054333JASPAR
PLAG10.000089954JASPAR
RREB10.0012659JASPAR
TFAP2A0.0020442JASPAR
Pax40.0037276JASPAR
Sites: 26/100 | e-val: 0.16
Factore-val(match)DB
TFAP2A0.00069167JASPAR
Zfx0.0013712JASPAR
PLAG10.0014129JASPAR
SP10.0014275JASPAR
TP530.0072221JASPAR

BED file downloads

Download top of 16567 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 3607160-3607310IRX125.51
chr8: 20093545-20093695SLC18A126.31
chr3: 128221665-128221815RP11-475N22.431.95
chr3: 128221665-128221815GATA231.95
chr1: 177150345-177150495ASTN132.24
chr1: 177150345-177150495BRINP232.24
chr8: 6481765-6481915CTD-2541M15.133.86
chr8: 101521320-101521470GAPDHP6236.71
chr10: 3106065-3106215PITRM139.3
chr6: 10391605-10391755RP1-290I10.341.77
View top connections.

Other

CodePlot