SOM cluster: 1118

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 78
Promoter: 3%
CpG-Island: 2%
Conserved: 17%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 9/78 | e-val: 0.0073
Factore-val(match)DB
Pax40.00000039837JASPAR
HNF1A0.0000052827JASPAR
HNF1B0.003322JASPAR
FOXO30.005037JASPAR
Prrx20.0063345JASPAR
Sites: 11/78 | e-val: 0.1
Factore-val(match)DB
RXR::RAR_DR50.0016075JASPAR
NFATC20.0036865JASPAR
NR2F10.011754JASPAR
RORA_10.015722JASPAR
NKX3-10.017721JASPAR
Sites: 12/78 | e-val: 0.16
Factore-val(match)DB
RREB10.00000000033455JASPAR
Pax40.000000016498JASPAR
SP10.0000025295JASPAR
Klf40.000027936JASPAR
ZNF354C0.0079611JASPAR
Sites: 14/78 | e-val: 0.37
Factore-val(match)DB
MEF2A0.00059004JASPAR
Lhx30.0081447JASPAR
NKX3-10.0083092JASPAR
HNF1B0.054534JASPAR
Foxq10.071053JASPAR

BED file downloads

Download top of 78 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr2: 133025040-133025190MIR663B58.69
chr9: 68418680-68418830MYO5BP362.01
chr2: 133019460-133019610ANKRD30BL80.69
chr12: 77459845-77459995E2F797.2
chr16: 33955245-33955395LINC00273112.06
chr16: 33957600-33957750RNA5-8SP2123
chr2: 133021880-133022030RNA5-8SP5133.03
chr17: 45213545-45213695CDC27140.49
chr13: 28033905-28034055RNU6-63P478.27
View top connections.

Other

CodePlot