SOM cluster: 1118
Cluster Hypersensitivity Profile
Genomic Location Trend
These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.Stats
Number of sites: 78Promoter: 3%
CpG-Island: 2%
Conserved: 17%
Enriched Motifs & Matches
Match Detail: [Jaspar]Sites: 9/78 | e-val: 0.0073 | ||
---|---|---|
Factor | e-val(match) | DB |
Pax4 | 0.00000039837 | JASPAR |
HNF1A | 0.0000052827 | JASPAR |
HNF1B | 0.003322 | JASPAR |
FOXO3 | 0.005037 | JASPAR |
Prrx2 | 0.0063345 | JASPAR |
Sites: 11/78 | e-val: 0.1 | ||
Factor | e-val(match) | DB |
RXR::RAR_DR5 | 0.0016075 | JASPAR |
NFATC2 | 0.0036865 | JASPAR |
NR2F1 | 0.011754 | JASPAR |
RORA_1 | 0.015722 | JASPAR |
NKX3-1 | 0.017721 | JASPAR |
Sites: 12/78 | e-val: 0.16 | ||
Factor | e-val(match) | DB |
RREB1 | 0.00000000033455 | JASPAR |
Pax4 | 0.000000016498 | JASPAR |
SP1 | 0.0000025295 | JASPAR |
Klf4 | 0.000027936 | JASPAR |
ZNF354C | 0.0079611 | JASPAR |
Sites: 14/78 | e-val: 0.37 | ||
Factor | e-val(match) | DB |
MEF2A | 0.00059004 | JASPAR |
Lhx3 | 0.0081447 | JASPAR |
NKX3-1 | 0.0083092 | JASPAR |
HNF1B | 0.054534 | JASPAR |
Foxq1 | 0.071053 | JASPAR |
BED file downloads
Top 10 Example Regions
Location | Gene Link | Dist. |
---|---|---|
chr2: 133025040-133025190 | MIR663B | 58.69 |
chr9: 68418680-68418830 | MYO5BP3 | 62.01 |
chr2: 133019460-133019610 | ANKRD30BL | 80.69 |
chr12: 77459845-77459995 | E2F7 | 97.2 |
chr16: 33955245-33955395 | LINC00273 | 112.06 |
chr16: 33957600-33957750 | RNA5-8SP2 | 123 |
chr2: 133021880-133022030 | RNA5-8SP5 | 133.03 |
chr17: 45213545-45213695 | CDC27 | 140.49 |
chr13: 28033905-28034055 | RNU6-63P | 478.27 |