SOM cluster: 1128

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 339
Promoter: 3%
CpG-Island: 0%
Conserved: 52%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 45/100 | e-val: 5.2e-16
Factore-val(match)DB
Foxd30.00000028831JASPAR
Foxq10.000058936JASPAR
SRY0.00015531JASPAR
Sox50.0006219JASPAR
Pax40.00078784JASPAR
Sites: 23/100 | e-val: 0.12
Factore-val(match)DB
NFATC20.0000045824JASPAR
Pax40.0028791JASPAR
FEV0.006015JASPAR
Pou5f10.018739JASPAR
IRF10.02419JASPAR

BED file downloads

Download top of 339 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 11372740-11372890CELF2-AS131.34
chr8: 69095680-69095830PREX234.82
chr3: 34249340-34249490AC018359.140.99
chr1: 156131620-156131770RAB2543.92
chr17: 58247225-58247375CA444.74
chr19: 54982240-54982390LENG845.49
chr19: 54982240-54982390LENG945.49
chr13: 103382180-103382330TPP247.86
chr13: 103382180-103382330ERCC547.86
chr3: 29554840-29554990RBMS348.07
View top connections.

Other

CodePlot