SOM cluster: 1143

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 383
Promoter: 27%
CpG-Island: 35%
Conserved: 63%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 94/100 | e-val: 0
Factore-val(match)DB
CTCF0.00000000088591JASPAR
SP10.0000000066204JASPAR
INSM10.00006415JASPAR
TFAP2A0.005576JASPAR
Klf40.015878JASPAR
Sites: 89/100 | e-val: 0.00000000038
Factore-val(match)DB
SP10.0000000089589JASPAR
Pax40.000048316JASPAR
Klf40.00074309JASPAR
RREB10.0041115JASPAR
Egr10.016741JASPAR

BED file downloads

Download top of 383 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 159895020-159895170SLAMF937.41
chr8: 22454840-22454990C8orf5839.51
chr8: 22454840-22454990AC037459.439.51
chr8: 22454840-22454990SORBS339.51
chr9: 132330220-132330370NTMT140.75
chr9: 132330220-132330370PRRX240.75
chr17: 12570780-12570930MYOCD40.8
chr17: 12570780-12570930LINC0067040.8
chr17: 56031900-56032050CUEDC141.78
chr17: 56031900-56032050VEZF141.78
View top connections.

Other

CodePlot