SOM cluster: 1153

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 3997
Promoter: 0%
CpG-Island: 0%
Conserved: 52%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 1.6e-30
Factore-val(match)DB
Lhx30.000001278JASPAR
Prrx20.000084784JASPAR
MEF2A0.00021712JASPAR
HNF1A0.00028613JASPAR
ARID3A0.00045307JASPAR

BED file downloads

Download top of 3997 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 105334020-105334170RIMS227.48
chr13: 102848040-102848190FGF14-IT134.33
chr12: 113248140-113248290RPH3A35.15
chr8: 79341840-79341990RP11-594N15.235.43
chr3: 38624680-38624830DDTP138.6
chr1: 50569480-50569630ELAVL439.62
chr1: 204553480-204553630RP11-23I7.139.64
chr1: 204553480-204553630MDM439.64
chr5: 66385040-66385190MAST4-AS140.88
chr4: 95793180-95793330BMPR1B42.37
View top connections.

Other

CodePlot