SOM cluster: 1188

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 198
Promoter: 0%
CpG-Island: 0%
Conserved: 45%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 53/100 | e-val: 2.5e-18
Factore-val(match)DB
RORA_10.0015476JASPAR
Foxd30.0038411JASPAR
Foxq10.0038428JASPAR
Foxa20.0061824JASPAR
SOX100.0062185JASPAR
Sites: 47/100 | e-val: 0.0000000027
Factore-val(match)DB
AP10.0000070955JASPAR
NKX3-10.000015965JASPAR
NFE2L20.000042341JASPAR
NFE2L1::MafG0.0086639JASPAR
MEF2A0.0097734JASPAR

BED file downloads

Download top of 198 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 162943140-162943290RGS434.97
chr8: 122525560-122525710HAS241.15
chr2: 75788320-75788470EVA1A52.8
chr2: 75788320-75788470U352.8
chr2: 75788320-75788470AC007099.152.8
chr10: 22723065-22723215SPAG656.37
chr5: 65097260-65097410SGTB56.65
chr3: 12517840-12517990TSEN257.26
chr14: 38612980-38613130CTD-2142D14.158.06
chr14: 38612980-38613130SSTR158.06
View top connections.

Other

CodePlot