SOM cluster: 1198

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 142
Promoter: 4%
CpG-Island: 0%
Conserved: 48%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 38/100 | e-val: 0.0000021
Factore-val(match)DB
RUNX10.00000012522JASPAR
INSM10.010524JASPAR
SOX100.016243JASPAR
ZNF354C0.022553JASPAR
En10.023032JASPAR
Sites: 14/100 | e-val: 0.052
Factore-val(match)DB
HNF1B0.00060333JASPAR
MEF2A0.00061471JASPAR
NKX3-10.0036305JASPAR
Foxd30.011872JASPAR
Lhx30.011939JASPAR
Sites: 19/100 | e-val: 0.0033
Factore-val(match)DB
TEAD10.000043212JASPAR
Foxd30.00076686JASPAR
Lhx30.0010687JASPAR
MEF2A0.0040903JASPAR
RELA0.0090022JASPAR

BED file downloads

Download top of 142 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 172938860-172939010RP1-15D23.256.87
chr3: 149191260-149191410WWTR160.35
chr3: 149191260-149191410RP11-278L15.360.35
chr7: 47835265-47835415C7orf6960.94
chr7: 47835265-47835415PKD1L160.94
chr10: 88447600-88447750BMPR1A61.82
chr10: 88447600-88447750RPL7AP861.82
chr19: 2639500-2639650DIRAS162.35
chr19: 2639500-2639650GNG762.35
chr7: 100324780-100324930TFR263.44
View top connections.

Other

CodePlot