SOM cluster: 1212

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 118
Promoter: 16%
CpG-Island: 9%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 25/100 | e-val: 0.000022
Factore-val(match)DB
HNF4A3.3307e-16JASPAR
NR2F10.0000000000000081046JASPAR
NR1H2::RXRA0.000000000089967JASPAR
PPARG::RXRA0.0000000010433JASPAR
SOX100.0016884JASPAR

BED file downloads

Download top of 118 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 72732765-72732915RAB3754.75
chr17: 72732765-72732915CD300LF54.75
chr17: 72732765-72732915SLC9A3R154.75
chr20: 30308660-30308810TPX260.52
chr19: 47598580-47598730SAE162.58
chr1: 182994980-182995130RP11-505O17.162.94
chr19: 4539965-4540115LRG166.8
chr20: 37076885-37077035SNORA71A68.52
chr20: 37076885-37077035SNHG1768.52
chr20: 37076885-37077035RP4-564F22.568.52
View top connections.

Other

CodePlot