SOM cluster: 1218

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 149
Promoter: 47%
CpG-Island: 63%
Conserved: 79%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 81/100 | e-val: 0
Factore-val(match)DB
SP10.0000040541JASPAR
Klf40.00045577JASPAR
TFAP2A0.0031279JASPAR
PLAG10.0071033JASPAR
Zfx0.0099198JASPAR
Sites: 83/100 | e-val: 1.3e-27
Factore-val(match)DB
TFAP2A0.000051756JASPAR
SP10.00026545JASPAR
Klf40.0041647JASPAR
INSM10.0067957JASPAR
Zfx0.019231JASPAR
Sites: 62/100 | e-val: 0.015
Factore-val(match)DB
SP10.00008013JASPAR
Pax40.001189JASPAR
CTCF0.0032841JASPAR
NHLH10.017262JASPAR
Myf0.02002JASPAR

BED file downloads

Download top of 149 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 56792240-56792390LYN36.18
chr8: 81083760-81083910TPD5239.07
chr9: 36400220-36400370RNF3854.47
chr4: 110651080-110651230CASP656.92
chr9: 130370720-130370870FAM129B60.11
chr8: 145016360-145016510PLEC62.78
chr8: 145016360-145016510PARP1062.78
chr8: 145016360-145016510NRBP262.78
chr19: 36001360-36001510DMKN64.48
chr16: 2244985-2245135PGP66.14
View top connections.

Other

CodePlot