SOM cluster: 1223

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 151
Promoter: 13%
CpG-Island: 6%
Conserved: 46%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 0.00000000000034
Factore-val(match)DB
TP530.00000000054048JASPAR
Zfx0.00022517JASPAR
Tcfcp2l10.00036848JASPAR
Klf40.0048202JASPAR
Egr10.013226JASPAR
Sites: 41/100 | e-val: 0.000015
Factore-val(match)DB
SP10.00000018984JASPAR
RREB10.00018588JASPAR
Klf40.0012884JASPAR
EWSR1-FLI10.0017389JASPAR
PPARG::RXRA0.0026815JASPAR
Sites: 26/100 | e-val: 0.38
Factore-val(match)DB
AP10.00000000004146JASPAR
NFE2L20.0000000025113JASPAR
Foxa20.0045367JASPAR
NFE2L1::MafG0.0047519JASPAR
PPARG0.0068476JASPAR

BED file downloads

Download top of 151 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 201366780-201366930RP11-134G8.842.16
chr1: 201366780-201366930RP11-134G8.242.16
chr1: 201366780-201366930PKP142.16
chr1: 201366780-201366930LAD142.16
chr19: 35587100-35587250GRAMD1A48.57
chr19: 35587100-35587250FXYD348.57
chr14: 23308460-23308610OXA1L49.45
chr20: 46294105-46294255CTD-2653D5.164.87
chr20: 46294105-46294255SULF264.87
chr8: 144655980-144656130MROH667.06
View top connections.

Other

CodePlot