SOM cluster: 1301

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 308
Promoter: 7%
CpG-Island: 3%
Conserved: 42%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 35/100 | e-val: 0.0000021
Factore-val(match)DB
CTCF0.000000000000024536JASPAR
INSM10.00033329JASPAR
TAL1::TCF30.0018142JASPAR
SP10.0030888JASPAR
ELK40.013698JASPAR

BED file downloads

Download top of 308 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 197886100-197886250LHX936.43
chr1: 197886100-197886250C1orf5336.43
chr1: 203123760-203123910RP11-335O13.847.84
chr9: 2242520-2242670SMARCA252.12
chr2: 30644660-30644810LCLAT153.8
chr15: 74470505-74470655STRA655.98
chr15: 74470505-74470655RP11-60L3.155.98
chr7: 107735660-107735810NRCAM57.62
chr2: 65298720-65298870RNU6-548P58.47
chr8: 105235280-105235430RIMS260.94
View top connections.

Other

CodePlot